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4 December 2004 Poster Session 1: 17:30 - 19:00
P001 Assaying the presence and polyadenylation state of H18 mRNA in mouse oocytes and early embryos
P. Ghadam
P002 Probing the structure of Saccharomyces cerevisiae RNase MRP
S.C. Walker, T.V. Aspinall, J.M.B. Gordon and J.M. Avis
P003 Structure of the high-affinity manganese(II) binding site in a natural hammerhead ribozyme
N. Kisseleva, J. Fritscher, A. Khvorova, E. Westhof and O. Schiemann
P004 The snRNP 15.5K protein folds its cognate K-turn RNA: a combined theoretical and biochemical study
V. Cojocaru, S. Nottrott, R. Klement, and T.M. Jovin
P005 Improving the accuracy of backbone conformations in large RNA structures
L.J.W. Murray, W.B. Arendall, III, C.-Y. Chen, D.C. Richardson and J.S. Richardson
P006 RNA backbone is rotameric
LJ.W. Murray, W.B. Arendall, III, D.C. Richardson and J.S. Richardson
P007 Twin ribozymes as molecular tools for site-specific modification of RNA
S. Vauléon and S. Müller
P008 Binary hammerhead ribozymes as effective tools for specific cleavage of RNA
M. Vorobjeva, E. Gusseva, N. Kovalev, M. Zenkova, A. Venyaminova and V. Vlassov
P009 Aberrant splicing of skeletal muscle chloride channel (ClC-1) in proximal myotonic myopathy (PROMM)
S.F. Ursu, A. Alekov, N.H. Mao, F. Lehmann-Horn and K. Jurkat-Rott
P010 Restricting the conformational dynamics of the ribosome by aminoglycoside antibiotics
K.B. Gromadski, W. Holtkamp and M.V. Rodnina
P011 Regulation of cardiac mAGPAT3 mRNA expression by PPARa
F. Xu, B. Lu, Y.J. Jiang, Y. Zhou, P.C. Choy and G.M. Hatch
P012 Cid1, a novel cytoplasmic poly(A) polymerase
A. Stevenson, R. Read, S.-W. Wang, B. Thomas and C. Norbury
P013 Artificial IRESs based on a novel target for PTB
K.A. Spriggs, S.-A. Mitchell, J. Le Quesne and A. Willis
P014 Engineered riboswitches to control gene expression by small molecules
S. Hanson and B. Suess
P015 The ribosome as an entropy trap
M. Beringer, A. Sievers, R. Wolfenden and M.V. Rodnina
P016 Direct stimulation of translation in vivo: a novel function of herpes simplex virus ICP27 protein
O. Larralde, R.P.W. Smith, G.S. Wilkie, J.D. Kean, P. Malik, N.K. Gray and J.B. Clements
P018 The connection between histone pre-mRNA processing factors and cell cycle
E.J. Wagner and W.F. Marzluff
P019 Exonic and intronic regulatory elements affect the splicing of human apolipoprotein A-II exon 3 carrying an atypical 39 splice site
P. Arrisi-Mercado, M. Romano, A. Muro and F.E. Baralle
P020 Modulation of NF1 exon 37 splicing: a disease-causing mutation changes an ESE into an ESS
N. Skoko, E. Buratti, A. Knezevich, F.E. Baralle and M. Baralle
P021 Specific subsets of mRNA molecules associate with the U2AF65 and PTB splicing factors
M. Gama-Carvalho, A. Brodsky, P. Silver and M. Carmo-Fonseca
P022 The relative amount of polypyrimidine tract-binding protein regulates in vivo the selection of a 39 terminal exon of the Xenopus a-tropomyosin pre-mRNA
C. Le Sommer, M.-R. Allo, S. Menoret and S. Hardy
P023 Structural studies of proteinRNA interactions in viral capsids
C.L. Bullock, S.W. Lane, W.T. Horn, N.J. Stonehouse, S.E.V. Phillips and P.G. Stockley
P024 Riboswitches as regulative tools introduction of an in vivo screening system in yeast
A. Hunsicker, S. Zeiher, M. Sanchez and B. Suess
P025 Oxygen stress response: triggers or triggered by gene expression according to mRNA noncoding sequences?
M. Brocard, S. Charreton, M. Galby, S. Paulous, K.M. Kean and A. Komarova
P026 Regulation of biogenesis of small subunit of prokaryotic ribosomes by protein S7.
A. Kopylov, T. Rassokhin, A. Golovin, V. Spiridonova and B. Kraal
P027 Analysis of the conserved cleavage sequence 59-CAU in the GIR1 ribozyme
H. Nielsen and S. Johansen
P028 Synthesis and structure of modified and 15N-enriched pseudouridine RNAs
C.S. Chow, J.-P. Desaulniers and Y.-C. Chang
P029 RNA binding and protein complex formation by the neuronal Drosophila proteins ELAV and FNE
C.D. Borgeson and M.-L. Samson
P030 Non-natural amino acid incorporation into protein by mitochondrial tRNAs having non-standard structure
T. Ohtsuki, T. Manabe and M. Sisido
P031 Impact of Ca21 on the group II intron ribozyme ai5g
M.C. Erat and R.K.O. Sigel
P032 Esf2p, a U3-associated factor required for the initial steps of small ribosomal subunit synthesis
T. Hoang, W.-T. Peng, E. Vanrobays, N. Krogan, S. Hiley, V. Ledent, J. Greenblatt, T.R. Hughes and D.L.J. Lafontaine
P033 The U6 small nuclear RNA directs exon alignment during pre-messenger RNA splicing
E. Tatum, J. Harford and R. O’Keefe
P034 Reverse splicing of a mobile twin-ribozyme group I intron into the natural SSU rRNA insertion site
Å.B. Birgisdottir and S. Johansen
P035 Testing the assembly of the small ribosomal subunit using group I intron-containing rRNA
P. Haugen, J. Maki, G. Culver and D. Bhattacharya
P036 Analysis of proteinprotein interactions involving splicing factor Snu13p
H. Dobbyn, P. McEwan, J. Bella and R. O’Keefe
P037 RNA-aptamers binding the dsRBD
M. Hallegger and M. Jantsch
P038 Structural and sequence analysis reveals multiple group I intron lineages among subgroup IE
Z. Li and Y. Zhang
P039 EPR spectroscopic analysis of U7 hammerhead ribozyme dynamics during metal ion folding
T.E. Edwards and S.T. Sigurdsson
P040 Ribosome synthesis meets the cell cycle
A. El Hage and D. Tollervey
P041 Choosy RNAs: an RNA-centric view of small-moleculeRNA binding selectivity
K. Blount, F. Zhao and Y. Tor
P042 Conformational investigation of the pre-mRNA branch site of the group II intron
J.C. Schlatterer, J.R. Kitchen, S.H. Crayton and N.L. Greenbaum
P043 Structurefunction studies of Prp8 protein
K. Boon, R. Grainger, A. Newman and J. Beggs
P044 Observation of internal cleavage and ligation reactions of a ribozyme
M.K. Nahas, T.J. Wilson, S. Hohng, K. Jarvie, D.M.J. Lilley and T. Ha
P045 Hammerhead ribozymes from Arabidopsis thaliana and Danio rerio
R. Przybilski, S. Gräf, W. Nellen, G. Steger and C. Hammann
P046 Molecular dynamics simulations and free energy calculations of base flipping in dsRNA
B. Nyström, K. Lindberg and L. Nilsson
P047 The structure of the kink-turn motif in RNA depends on metal ions and L7Ae protein binding
B. Turner, S.E. Melcher, T.A. Goody, D.G. Norman and D.M.J. Lilley
P048 SF2/ASF binds the HPV-16 late RNA control element and are regulated during differentiation of virus-infected epithelial cells.
L. Yule, T. Veerapraditsin, M.G. McPhillips, S.G. Milligan, J. Zhang and S.V. Graham
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