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RNA Structure and Function: a joint Biochemical Society/Royal Society of Chemistry Focused Meeting

4—6 December 2004

Michael Swann Building, University of Edinburgh, UK



Sponsors:

Timetable

Saturday 4 December 2004Sunday 5 December 2004Monday 6 December 2004
09:30 - 12:40
Session 1

14:00 - 17:35
Session 2

09:30 - 17:30
Session 3

09:30 - 12:40
Session 4

14:00 - 17:10
Session 5


Session 1

Chair:
Sheila Graham (Glasgow, UK)
Saturday 4 December 2004
09:30 - 10:10
RNA interactions of Prp8p in the core of the spliceosome
Andy Newman (MRC-LMB, Cambridge, UK)
10:10 - 10:50
Structure-function analysis of the U2 snRNP-associated splicing factor SF3a
Angela Krämer (Geneva, Switzerland)
10:50 - 11:20 Coffee/tea break

11:20 - 12:00
Multiple roles of arginine/serine-rich splicing factors in RNA processing
Javier Cáceres (Edinburgh, UK)
12:00 - 12:40
Structural dynamics and function of the mammalian spliceosome
Reinhardt Lührmann (Max Planck Institute for Biophysical Chemistry, Göttingen, Germany)
12:40 - 14:00 Lunch

Session 2

Chair:
Mary O'Connell (Western General Hospital, Edinburgh, UK)

Novartis Medal Lecture

Saturday 4 December 2004
14:00 - 14:40
Structural analysis of the U2-U6 RNA complex
Sam Butcher (Madison, WI, USA)
14:40 - 15:20
Mode of action of proteins with RNA chaperone activity
Renée Schroeder (Vienna, Austria)
15:20 - 15:50 Coffee/tea break

15:50 - 16:30
Regulation of alternative splicing by PTB and associated factors
Chris Smith (Cambridge, UK)
16:30 - 16:35
Presentation of the Novartis Medal
Peter Downes (Dundee, UK)
16:35 - 17:35
Novartis Medal Lecture
RNA processing and the Lsm proteins
Novartis Medal Lecture - Jean Beggs (Edinburgh, UK)
17:35 - 19:00 Poster Session (with poster prize awarded by Nature Reviews Molecular Cell Biology)

20:00
Meeting Dinner and Ceilidh (Radisson SAS Hotel, Edinburgh)

Session 3

Chair:
Fritz Eckstein (Göttingen, Germany)
Sunday 5 December 2004
09:30 - 10:10
Role of a conserved pseudouridine in recognition of the spliceosomal branch site
Nancy Greenbaum (Florida, FL, USA)
10:10 - 10:50
Ribozyme folding and catalysis
David Lilley (Dundee, UK)
10:50 - 11:20 Coffee/tea break

11:20 - 12:00
Linkage between proton binding and RNA folding: a thermodynamic framework and its experimental application for investigating pKa shifting
Philip Bevilacqua (Pennsylvania, PA, USA)

Selected poster presentations

Chair:
To be announced
Sunday 5 December 2004
12:00 - 12:40
Active site cytosine in the hepatitis delta virus ribozyme provides general acid catalysis (sponsored by Glen Research)
The Glen Lecture - Joseph Piccirilli (Chicago, IL, USA)
12:40 - 14:00 Lunch

14:00 - 14:15
The connection between histone pre-mRNA processing factors and cell cycle
Selected poster presentation - Eric Wagner (North Carolina, USA)
14:15 - 14:30
Engineered riboswitches to control gene expression by small molecules
Selected poster presentation - Beatrix Suess (Erlangen, Germany)
14:30 - 14:45
Specific subsets of mRNA molecules associate with the U2AF65 and PTB splicing factors
Selected poster presentation - Margarida Gama-Carvalho (Lisbon, Portugal)
14:45 - 15:00
Hammerhead ribozymes from A. thaliana and D. rerio
Selected poster presentation - Christian Hammann (Kassel, Germany)
15:00 - 15:15
Exonic and intronic regulatory elements affect the splicing of human Apolipoprotein AII exon 3 carrying atypical 3¿ splice site
Selected poster presentation - Pablo Arrisi-Mercado (International Centre for Genetic Engineering and Biotechnology, Trieste, Italy)
15:15 - 15:30
Structure of the high-affinity manganese(II) binding site in a natural hammerhead ribozyme
Selected poster presentation - Olav Schiemann (Frankfurt/Main, Germany)
15:30 - 16:00 Coffee/tea break

16:00 - 16:15
Probing the structure of Saccharomyces cerevisiae RNAse MRP
Selected poster presentation - Johanna Avis (Manchester, UK)
16:15 - 16:30
Reverse splicing of a mobile twin-ribozyme group I intron into the natural SSU rRNA insertion site
Selected poster presentation - Steinar Johansen (Tromsø, Norway )
16:30 - 16:45
Direct stimulation of translation in vivo: a novel function of herpes simplex virus ICP27 protein
Selected poster presentation - Osmany Larralde (Glasgow, UK)
16:45 - 17:00
Modulation of NF1 exon 37 splicing: disease causing mutation changes an ESE into an ESS
Selected poster presentation - Natasa Skoko (Trieste, Italy)
17:00 - 17:15
The U6 small nuclear RNA directs exon alignment during pre-mRNA splicing
Selected poster presentation - Ray O'Keefe (Manchester, UK)
17:15 - 17:30
Analyzing RNA backbone conformations
Selected poster presentation - Jane Richardson (Duke, Durham, NC, USA)

Session 4

Chair:
Nicola Gray (Western General Hospital, Edinburgh, UK)
Monday 6 December 2004
09:30 - 10:10
Ribosomal crystallography: from peptide bond formation to cotranslational folding
Ada Yonath (Weizmann Institute, Rehovot, Israel)
10:10 - 10:50
Substrate selection and the mechanism of peptide bond formation by the ribosome
Marina Rodnina (Witten/Herdecke, Germany)
10:50 - 11:20 Coffee/tea break

11:20 - 12:00
Structure and dynamics in translation
Jody Puglisi (Stanford, CA, USA)
12:00 - 12:40
Nuclear RNA degradation by the exosome is promoted by a polyadenylation complex
David Tollervey (Edinburgh, UK)
12:40 - 14:00 Lunch

Session 5

Chair:
Mike Gait (Cambridge, UK)
Monday 6 December 2004
14:00 - 14:40
Molecular recognition of the ribosomal decoding site by aminoglycoside antibiotics
Eric Westhof (IBNC-CNRS, Strasbourg, France)
14:40 - 15:20
Ribozymes as reporters for biomolecular interactions
Michael Famulok (Bonn, Germany)
15:20 - 15:50 Coffee/tea break

15:50 - 16:30
Structural basis for Diels-Alder ribozyme catalyzed carbon-carbon bond formation
Andres Jaeschke (Ruprecht Karls University, Heidelberg, Germany)
16:30 - 17:10
Interconnecting mRNA 3¿ end processing, transcription and chromatin structure
Nick Proudfoot (Oxford, UK)